Didier, Debroas: search on Z-Library

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1

Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems

Singer, David, Seppey, Christophe V.W., Lentendu, Guillaume, Dunthorn, Micah, Bass, David, Belbahri, LassÃ¢ad, Blandenier, Quentin, Debroas, Didier, de Groot, G. Arjen, de Vargas, Colomban, Domaizon,

Journal:

Environment International

Year:

2021

File:

PDF, 1.28 MB

2021

2

Spatio-Temporal Variations of Marine Biofilm Communities Colonizing Artificial Substrata Including Antifouling Coatings in Contrasted French Coastal Environments

Briand, Jean-François, Barani, Aude, Garnier, Cédric, Réhel, Karine, Urvois, Félix, LePoupon, Christophe, Bouchez, Agnès, Debroas, Didier, Bressy, Christine

Journal:

Microbial Ecology

Year:

2017

Language:

english

File:

PDF, 1.96 MB

english, 2017

3

Bacterial Communities Associated with Four Cyanobacterial Genera Display Structural and Functional Differences: Evidence from an Experimental Approach

Zhu, Lin, Zancarini, Anouk, Louati, Imen, De Cesare, Silvia, Duval, Charlotte, Tambosco, Kevin, Bernard, Cécile, Debroas, Didier, Song, Lirong, Leloup, Julie, Humbert, Jean-François

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 1.55 MB

english, 2016

4

Genomic ecology of Marine Group II, the most common marine planktonic Archaea across the surface ocean

Pereira, Olivier, Hochart, Corentin, Auguet, Jean Christophe, Debroas, Didier, Galand, Pierre E.

Journal:

MicrobiologyOpen

Year:

2019

Language:

english

File:

PDF, 1.71 MB

english, 2019

5

Comparison of the structure and composition of bacterial communities from temperate and tropical freshwater ecosystems

Jean-F. Humbert, Ursula Dorigo, Philippe Cecchi, Brigitte Le Berre, Didier Debroas, Marc Bouvy

Journal:

Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 611 KB

english, 2009

6

Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems

Lepère, Cécile, Domaizon, Isabelle, Taïb, Najwa, Mangot, Jean-François, Bronner, Gisèle, Boucher, Delphine, Debroas, Didier

Journal:

FEMS Microbiology Ecology

Year:

2013

Language:

english

File:

PDF, 464 KB

english, 2013

7

Monitoring of enterovirus diversity in wastewater by ultra-deep sequencing: An effective complementary tool for clinical enterovirus surveillance

Bisseux, Maxime, Didier, Debroas, Audrey, Mirand, Christine, Archimbaud, Hélène, Peigue-Lafeuille, Jean-Luc, Bailly, Cécile, Henquell

Journal:

Year:

2020

File:

PDF, 853 KB

2020

8

Effects of Viruses and Predators on Prokaryotic Community Composition

Ludwig Jardillier, Yvan Bettarel, Mathilde Richardot, Corinne Bardot, Christian Amblard, Télesphore Sime-Ngando, Didier Debroas

Journal:

Microbial Ecology

Year:

2005

Language:

english

File:

PDF, 563 KB

english, 2005

9

Comparison of 16S rRNA and protein-coding genes as molecular markers for assessing microbial diversity (Bacteria and Archaea) in ecosystems

Simon Roux, François Enault, Gisè le Bronner, Didier Debroas

Journal:

FEMS Microbiology Ecology

Year:

2011

Language:

english

File:

PDF, 193 KB

english, 2011

10

A De Novo Robust Clustering Approach for Amplicon-Based Sequence Data

Bazin, Alexandre, Debroas, Didier, Mephu Nguifo, Engelbert

Journal:

Journal of Computational Biology

Year:

2018

Language:

english

File:

PDF, 202 KB

english, 2018

11

Effects of nutrients and warming on Planktothrix dynamics and diversity: a palaeolimnological view based on sedimentary DNA and RNA

Savichtcheva, Olga, Debroas, Didier, Perga, Marie Elodie, Arnaud, Fabien, Villar, Clément, Lyautey, Emilie, Kirkham, Amy, Chardon, Cécile, Alric, Benjamin, Domaizon, Isabelle

Journal:

Freshwater Biology

Year:

2015

Language:

english

File:

PDF, 945 KB

english, 2015

12

Monitoring human enteric viruses in wastewater and relevance to infections encountered in the clinical setting: a one-year experiment in central France, 2014 to 2015

Bisseux, Maxime, Colombet, Jonathan, Mirand, Audrey, Roque-Afonso, Anne-Marie, Abravanel, Florence, Izopet, Jacques, Archimbaud, Christine, Peigue-Lafeuille, Hélène, Debroas, Didier, Bailly, Jean-Luc,

Journal:

Eurosurveillance

Year:

2018

Language:

english

File:

PDF, 566 KB

english, 2018

13

Breakdown of peptides from a soya protein hydrolysate by rumen bacteria. Simultaneous study of enzyme activities and of two physico-chemical parameters: Molecular weight and hydrophobicity

Nathalie Depardon, Didier Debroas, Gerard Blanchart

Journal:

Journal of the Science of Food and Agriculture

Year:

1995

Language:

english

File:

PDF, 608 KB

english, 1995

14

Diversity and Dynamics of Active Small Microbial Eukaryotes in the Anoxic Zone of a Freshwater Meromictic Lake (Pavin, France)

Lepère, Cécile, Domaizon, Isabelle, Hugoni, Mylène, Vellet, Agnès, Debroas, Didier

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 2.41 MB

english, 2016

15

Relative importance of nutrients and mortality factors on prokaryotic community composition in two lakes of different trophic status: Microcosm experiments

Ludwig Jardillier, Delphine Boucher, Sébastien Personnic, Stéphan Jacquet, Aurélie Thénot, Denis Sargos, Christian Amblard, Didier Debroas

Journal:

FEMS Microbiology Ecology

Year:

2005

Language:

english

File:

PDF, 490 KB

english, 2005

16

Bacterial communities associated with Microcystis colonies differ from free-living communities living in the same ecosystem

Parveen, Bushra, Ravet, Viviane, Djediat, Chakib, Mary, Isabelle, Quiblier, Catherine, Debroas, Didier, Humbert, Jean-François

Journal:

Environmental Microbiology Reports

Year:

2013

Language:

english

File:

PDF, 544 KB

english, 2013

17

Is Planktonic Diversity Well Recorded in Sedimentary DNA? Toward the Reconstruction of Past Protistan Diversity

Capo, Eric, Debroas, Didier, Arnaud, Fabien, Domaizon, Isabelle

Journal:

Microbial Ecology

Year:

2015

Language:

english

File:

PDF, 1.05 MB

english, 2015

18

Incorporation of3H-Thymidine by Different Prokaryotic Groups in Relation to Temperature and Nutrients in a Lacustrine Ecosystem

Delphine Boucher, Mathilde Richardot, Aurélie Thénot, Didier Debroas

Journal:

Microbial Ecology

Year:

2006

Language:

english

File:

PDF, 334 KB

english, 2006

19

Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes

Mangot, Jean-François, Domaizon, Isabelle, Taib, Najwa, Marouni, Nemr, Duffaud, Emilie, Bronner, Gisèle, Debroas, Didier

Journal:

Environmental Microbiology

Year:

2013

Language:

english

File:

PDF, 965 KB

english, 2013

20

Evidence for an active rare biosphere within freshwater protists community

Debroas, Didier, Hugoni, Mylène, Domaizon, Isabelle

Journal:

Molecular Ecology

Year:

2015

Language:

english

File:

PDF, 936 KB

english, 2015

21

Tracking a century of changes in microbial eukaryotic diversity in lakes driven by nutrient enrichment and climate warming

Capo, Eric, Debroas, Didier, Arnaud, Fabien, Perga, Marie-Elodie, Chardon, Cécile, Domaizon, Isabelle

Journal:

Environmental Microbiology

Year:

2017

Language:

english

File:

PDF, 2.16 MB

english, 2017

22

New insights into the pelagic microorganisms involved in the methane cycle in the meromictic Lake Pavin through metagenomics

Corinne, Biderre-Petit, Najwa, Taib, Hélène, Gardon, Corentin, Hochart, Didier, Debroas

Journal:

FEMS Microbiology Ecology

Year:

2018

Language:

english

File:

PDF, 1.90 MB

english, 2018

23

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget – France)

Didier Debroas, Jean-François Humbert, François Enault, Gisèle Bronner, Michael Faubladier, Emmanuel Cornillot

Journal:

Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 1.68 MB

english, 2009

24

Metavir 2: new tools for viral metagenome comparison and assembled virome analysis

Roux, Simon, Tournayre, Jeremy, Mahul, Antoine, Debroas, Didier, Enault, François

Journal:

BMC Bioinformatics

Year:

2014

Language:

english

File:

PDF, 934 KB

english, 2014

25

Technical challenges in metatranscriptomic studies applied to the bacterial communities of freshwater ecosystems

Pascault, Noémie, Loux, Valentin, Derozier, Sandra, Martin, Véronique, Debroas, Didier, Maloufi, Selma, Humbert, Jean-François, Leloup, Julie

Journal:

Year:

2015

Language:

english

File:

PDF, 720 KB

english, 2015

26

Deciphering biodiversity and interactions between bacteria and microeukaryotes within epilithic biofilms from the Loue River, France

Zancarini, Anouk, Echenique-Subiabre, Isidora, Debroas, Didier, Taïb, Najwa, Quiblier, Catherine, Humbert, Jean-François

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.94 MB

english, 2017

27

Incorporation of ³H-Thymidine by Different Prokaryotic Groups in Relation to Temperature and Nutrients in a Lacustrine Ecosystem

Delphine Boucher, Mathilde Richardot, Aurélie Thénot and Didier Debroas

Journal:

Microbial Ecology

Year:

2006

Language:

english

File:

PDF, 1.85 MB

english, 2006

28

Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments

Jeanbille, Mathilde, Gury, Jérôme, Duran, Robert, Tronczynski, Jacek, Ghiglione, Jean-François, Agogué, Hélène, Saïd, Olfa Ben, Taïb, Najwa, Debroas, Didier, Garnier, Cédric, Auguet, Jean-Christophe

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 4.86 MB

english, 2016

29

Viruses as key reservoirs of antibiotic resistance genes in the environment

Debroas, Didier, Siguret, Cléa

Journal:

The ISME Journal

Year:

2019

Language:

english

File:

PDF, 1.51 MB

english, 2019

30

Overview of freshwater microbial eukaryotes diversity: a first analysis of publicly available metabarcoding data

Debroas, Didier, Domaizon, Isabelle, Humbert, Jean-Francois, Jardillier, Ludwig, Lepère, Cécile, Oudart, Anne, Taïb, Najwa

Journal:

FEMS Microbiology Ecology

Year:

2017

Language:

english

File:

PDF, 2.03 MB

english, 2017

31

Effects of Viruses and Predators on Prokaryotic Community Composition

Ludwig Jardillier, Yvan Bettarel, Mathilde Richardot, Corinne Bardot, Christian Amblard, Télesphore Sime-Ngando and Didier Debroas

Journal:

Microbial Ecology

Year:

2005

Language:

english

File:

PDF, 2.73 MB

english, 2005

32

Temporal covariation of epibacterial community and surface metabolome in the Mediterranean seaweed holobiont Taonia atomaria

Paix, Benoit, Othmani, Ahlem, Debroas, Didier, Culioli, Gérald, Briand, Jean‐François

Journal:

Environmental Microbiology

Year:

2019

Language:

english

File:

PDF, 1.96 MB

english, 2019

33

Short-term responses of unicellular planktonic eukaryotes to increases in temperature and UVB radiation

Isabelle Domaizon, Cécile Lepère, Didier Debroas, Marc Bouvy, Jean Francois Ghiglione, Stephan Jacquet, Yvan Bettarel, Corinne Bouvier, Jean Pascal Torréton, Francesca Vidussi, Behzad Mostajir, Amy Ki

Journal:

BMC Microbiology

Year:

2012

Language:

english

File:

PDF, 442 KB

english, 2012

34

Community composition and activity of prokaryotes associated to detrital particles in two contrasting lake ecosystems

Charles Lemarchand, Ludwig Jardillier, Jean-François Carrias, Mathilde Richardot, Didier Debroas, Télesphore Sime-Ngando, Christian Amblard

Journal:

FEMS Microbiology Ecology

Year:

2006

Language:

english

File:

PDF, 136 KB

english, 2006

35

Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea

Hugoni, Mylène, Agogué, Hélène, Taib, Najwa, Domaizon, Isabelle, Moné, Anne, Galand, Pierre E., Bronner, Gisèle, Debroas, Didier, Mary, Isabelle

Journal:

Microbial Ecology

Year:

2015

Language:

english

File:

PDF, 1.81 MB

english, 2015

36

How Does Environmental Inter-annual Variability Shape Aquatic Microbial Communities? A 40-Year Annual Record of Sedimentary DNA From a Boreal Lake (Nylandssjön, Sweden)

Capo, Eric, Rydberg, Johan, Tolu, Julie, Domaizon, Isabelle, Debroas, Didier, Bindler, Richard, Bigler, Christian

Journal:

Frontiers in Ecology and Evolution

Year:

2019

Language:

english

File:

PDF, 1.50 MB

english, 2019

37

Long-term dynamics in microbial eukaryotes communities: a paleolimnological view based on sedimentary DNA

Capo, Eric, Debroas, Didier, Arnaud, Fabien, Guillemot, Typhaine, Bichet, Vincent, Millet, Laurent, Gauthier, Emilie, Massa, Charly, Develle, Anne-Lise, Pignol, Cécile, Lejzerowicz, Franck, Domaizon,

Journal:

Molecular Ecology

Year:

2016

Language:

english

File:

PDF, 970 KB

english, 2016

38

Community composition of lacustrine small eukaryotes in hyper-eutrophic conditions in relation to top-down and bottom-up factors

Cécile Lepère, Isabelle Domaizon, Didier Debroas

Journal:

FEMS Microbiology Ecology

Year:

2007

Language:

english

File:

PDF, 270 KB

english, 2007

39

Diversity of Rare and Abundant Prokaryotic Phylotypes in the Prony Hydrothermal Field and Comparison with Other Serpentinite-Hosted Ecosystems

Frouin, Eléonore, Bes, Méline, Ollivier, Bernard, Quéméneur, Marianne, Postec, Anne, Debroas, Didier, Armougom, Fabrice, Erauso, Gaël

Journal:

Frontiers in Microbiology

Year:

2018

Language:

english

File:

PDF, 4.05 MB

english, 2018

40

Assessing the response of micro-eukaryotic diversity to the Great Acceleration using lake sedimentary DNA

Keck, FranÃ§ois, Millet, Laurent, Debroas, Didier, Etienne, David, Galop, Didier, Rius, Damien, Domaizon, Isabelle

Journal:

Nature Communications

Year:

2020

File:

PDF, 750 KB

2020

41

Proteolytic and glycolytic activities in size-fractionated surface water samples from an oligotrophic reservoir in relation to plankton communities

Mathilde Richardot, Didier Debroas, Antoine Thouvenot, Jean Claude Romagoux, Jean Louis Berthon, Jean Devaux

Journal:

Aquatic Sciences

Year:

1999

Language:

english

File:

PDF, 355 KB

english, 1999

42

Diversity and dynamics of free-living and particle-associated Betaproteobacteria and Actinobacteria in relation to phytoplankton and zooplankton communities

Bushra Parveen, Jean-Philippe Reveilliez, Isabelle Mary, Viviane Ravet, Gisèle Bronner, Jean-François Mangot, Isabelle Domaizon, Didier Debroas

Journal:

FEMS Microbiology Ecology

Year:

2011

Language:

english

File:

PDF, 2.11 MB

english, 2011

43

Vertical structure of small eukaryotes in three lakes that differ by their trophic status: a quantitative approach

Lepère, Cecile, Masquelier, Sylvie, Mangot, Jean-François, Debroas, Didier, Domaizon, Isabelle

Journal:

The ISME Journal

Year:

2010

Language:

english

File:

PDF, 628 KB

english, 2010

44

A physical-microbial food web coupled model to study the evolution of the ecological functioning of a new reservoir after its flooding (Sep, Puy de Dôme)

Anne Roué-Le Gall, Michel Poulin, Didier Debroas, Nicolas Flipo

Journal:

Ecological Modelling

Year:

2009

Language:

english

File:

PDF, 1.21 MB

english, 2009

45

Dynamics of ammonia-oxidizing Archaea and Bacteria in contrasted freshwater ecosystems

Hugoni, Mylène, Etien, Sandrine, Bourges, Antoine, Lepère, Cécile, Domaizon, Isabelle, Mallet, Clarisse, Bronner, Gisèle, Debroas, Didier, Mary, Isabelle

Journal:

Research in Microbiology

Year:

2013

Language:

english

File:

PDF, 871 KB

english, 2013

46

Plastics in the North Atlantic garbage patch: A boat-microbe for hitchhikers and plastic degraders

Didier, Debroas, Anne, Mone, Alexandra, Ter Halle

Journal:

Science of The Total Environment

Year:

2017

Language:

english

File:

PDF, 2.93 MB

english, 2017

47

To what extent is the DNA of microbial eukaryotes modified during burying into lake sediments? A repeat-coring approach on annually laminated sediments

Capo, Eric, Domaizon, Isabelle, Maier, Dominique, Debroas, Didier, Bigler, Christian

Journal:

Journal of Paleolimnology

Year:

2017

Language:

english

File:

PDF, 1.48 MB

english, 2017

48

Temporal dynamics of active A rchaea in oxygen-depleted zones of two deep lakes

Hugoni, Mylène, Domaizon, Isabelle, Taib, Najwa, Biderre-Petit, Corinne, Agogué, Hélène, Galand, Pierre E., Debroas, Didier, Mary, Isabelle

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 595 KB

english, 2015

49

Perkinsozoa, a well-known marine protozoan flagellate parasite group, newly identified in lacustrine systems: a review

Jean-François Mangot, Didier Debroas, Isabelle Domaizon

Journal:

Year:

2011

Language:

english

File:

PDF, 467 KB

english, 2011

50

Evolution and Diversity of the Microviridae Viral Family through a Collection of 81 New Complete Genomes Assembled from Virome Reads

Roux, Simon, Krupovic, Mart, Poulet, Axel, Debroas, Didier, Enault, François, Dutilh, Bas E.

Journal:

Year:

2012

Language:

english

File:

PDF, 641 KB

english, 2012

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